Why use reForge? ================ Need to simulate a large biomolecular complex? Or even many? ------------------------------------------------------------ Then reForge is the right tool. If offers a (*almost*) pain-free setup for Martini+CG Protein/RNA/Lipid complexes. .. image:: img/reforge_ribosome.png :alt: reForge Ribosome :scale: 50 % Python-Based ------------ reForge is built entirely in *Python*, making it easy to use and integrate. - **Simple Scripts:** A couple of Python scripts are all you need. Whether you run tens or hundreds of MD simulations, reForge handles it with just one button press. Accelerated C- and CUDA Routines -------------------------------- - **High Performance:** Process terabytes of data with remarkable speed compared to standard Python and NumPy. .. image:: img/reforge_speedup.png :alt: reForge Speedup Performance :scale: 60 % This performance gain is impressive even for a medium-sized system of about 1000 residues. Imagine scaling up to hundreds or thousands of systems! Tools for Custom Model Development ------------------------------------ Build your own models and integrate them with existing MD engines and analysis tools. .. image:: img/reforge_dsrna.png :alt: reForge dsRNA :scale: 30 % For New Users ------------- - **Tutorials:** Tutorials and examples that demonstrate basic workflows are provided with the package. Indices and Tables ------------------ * :ref:`genindex` * :ref:`modindex` * :ref:`search`